BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E12LP1|AL425558
(1105 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 723 0.0
3x_Contig462 483 e-136
>3x_Contig1609
Length = 15966
Score = 723 bits (364), Expect = 0.0
Identities = 390/397 (98%), Gaps = 3/397 (0%)
Strand = Plus / Minus
Query: 711 gtattaacaacttgcactcttacgaaaagcgtttgcacaactaagtgtagaaaataaaac 770
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 15966 gtattaacaacttgcactcttacgaaaagcgtttgcacaactaagtgtagaaaatanaac 15907
Query: 771 tgttctaaggatgcattattaacattccaaagtaaactttattagactttgctattgtct 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15906 tgttctaaggatgcattattaacattccaaagtaaactttattagactttgctattgtct 15847
Query: 831 tgtacattaaactaatatatacgctcattacacatatatattaagtattagaaaaaaaaa 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15846 tgtacattaaactaatatatacgctcattacacatatatattaagtattagaaaaaaaaa 15787
Query: 891 actttttcttcatcattataacacaatgcgattgattaagttaggagggacagctctaat 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15786 actttttcttcatcattataacacaatgcgattgattaagttaggagggacagctctaat 15727
Query: 951 ttcatatttgatcacctttaatcttttgtaacawatctctatagtacttttctctctcag 1010
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15726 ttcatatttgatcacctttaatcttttgtaacatatctctatagtacttttctctctcag 15667
Query: 1011 attccatttcttccatctttgggtggt-mcctttcgttgatgagatcttgcttcctagcc 1069
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 15666 attccatttcttccatcttt-ggtggtaccctttcgttgatgagatcttgcttcctagcc 15608
Query: 1070 ttctcaaattcgcttaarg-ttctgttagaccttcgg 1105
||||||||||||||||| | |||||||||||||||||
Sbjct: 15607 ttctcaaattcgcttaaagtttctgttagaccttcgg 15571
>3x_Contig462
Length = 1492
Score = 483 bits (243), Expect = e-136
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 1 tgttgttgtcgtggattcttctcaagataactccattttccaactgaacatgcttgaatg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1241 tgttgttgtcgtggattcttctcaaggtaactccattttccaactgaacatgcttgaatg 1300
Query: 61 gatcaagaagaccttcccagatttggaagtcatcgctggtaatgtcgttaccagagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 gatcaagaagaccttcccagatttggaagtcatcgctggtaatgtcgttaccagagaaca 1360
Query: 121 agccgccagtttgattgctgctggtgcagacggtttgagaattggtatgggttcaggttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 agccgccagtttgattgctgctggtgcagacggtttgagaattggtatgggttcaggttc 1420
Query: 181 catttgtataacacaagaagttatggcttgtggtagacctcaaggtactgccgtttacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 catttgtataacacaagaagttatggcttgtggtagacctcaaggtactgccgtttacaa 1480
Query: 241 cgtcact 247
|||||||
Sbjct: 1481 cgtcact 1487
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9440
Number of Sequences: 1807
Number of extensions: 9440
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 2
length of query: 1105
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1089
effective length of database: 10,329,639
effective search space: 11248976871
effective search space used: 11248976871
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.8 bits)